LPS-MIA base analysis

Post-normalization QC

  1. Performing post-normalization QC:

Post-correction QC

  1. Post-correction QC

DESeq2 anaylsis

  1. Performing DESeq2

out of 17498 with nonzero total read count adjusted p-value < 0.1 LFC > 0 (up) : 9, 0.051% LFC < 0 (down) : 4, 0.023% outliers [1] : 0, 0% low counts [2] : 3732, 21% (mean count < 10) [1] see ‘cooksCutoff’ argument of ?results [2] see ‘independentFiltering’ argument of ?results

Interactive results table

(5.1) Results